
Fishes
comprises over 50% of all described species of vertebrates. They are
present in, and constitute a large part of, the biodiversity of every
aquatic ecosystem, and often play a dominant ecological role. In
spite of their importance, fishes are the least known and least
studied vertebrates. The patterns of their evolution, and the
processes that have promoted them are much less understood than those
of the various clades of tetrapods. Furthermore, an understanding of
fish evolution is hampered by the lack of communication that has
historically existed between pattern-oriented biologists, such as
systematists and paleontologists, and process-oriented scientists
such as ecologists, biogeographers and developmental biologists. This
symposium aims at bringing together pattern- and process-scientists,
in the search for a better understanding of the evolution of
non-tetrapod vertebrates. Our program will bring together
systematists and comparative morphologists with developmental
biologists and genome scientists, for exciting discussions about the
origin of novel morphologies and their roles in the diversifications
of the various fish clades. Historical biogeographers and
paleobiologists will have the opportunity to talk with community
ecologists and ecological biogeographers about patterns of
diversifications and their causes.
This
symposium is extremely timely. First, it will be a clear example of
the importance of integrative and comparative biology, and most talks
will have a strong phylogenetic component. The symposium will provide
an opportunity to consolidate cutting edge information in fish
systematics. Furthermore, certain fish taxa, such as Takifugu
rubripes and Danio rerio have been selected as model
organisms for the study of the vertebrate genome and vertebrate
development. This symposium will bring together scientists who work
on model organisms with scientists working on non-model organisms,
promoting ichthyological research of greater depth and breadth.
TENTATIVE SCHEDULE
DAY 1 - Monday January 6th, P.M.| 12.50 - 13.00 | Francesco Santini & Gustavo Ybazeta. "Welcome and introduction to the symposium." |
| 13.00 - 13.40 | John G. Maisey. "CT scanning and the evolution of the elasmobranch braincase." |
| 13.40 - 14.20 | Gloria Arratia. "Origin and early radiation of Teleosteii." |
| 14.20 - 15.00 | G. David Johnson. "Diversity of the Acanthomorpha." |
| 15.00 - 15.20 | COFFEE BREAK |
| 15.20 - 15.40 | Masaki Miya. "Major patterns of actinopterygian phylogenies: A new perspective based on >200 complete mitochondrial DNA sequences." |
| 15.40 - 16.00 | Agnes Dettai. "New clades within the acanthomorph radiation from taxonomic congruence among nuclear and mitochondrial genes." |
| 16.00 - 16.20 | Lynne R. Parenti. "Evolution and Phylogeny of Gonad Morphology in Bony Fishes." |
| 16.20 - 16.40 | Andrew P. Martin. "Gene duplications and phylogenetic inference of vertebrates: the perils of paralogy" |
| 16.40 - 17.00 | Questions and answers. |
| 8.20 - 8.40 | John H. Postlethwait. "The role of genome duplication in the origin of developmental novelties and radiation of ray-fin fish." |
| 8.40 - 9.00 | Edmund Stellwag. "Ray-finned fish genome duplication, organismal complexity and gene value optima." |
| 9.00 - 9.20 | Paula M. Mabee. "Evolution of Median Fin Modules in the Axial Skeleton of Fishes." |
| 9.20 - 9.40 | Mark W. Westneat. "Functional Morphology of Feeding in Fishes: Phylogenetic Trends in Mechanical Design of Cranial Levers and Linkages." |
| 9.40 - 10.00 | Questions and answers. |
| 10.00 - 10.20 | COFFEE BREAK |
| 10.20 - 10.40 | Eldredge Bermingham. "Evolutionary assembly of the Mesoamerican freshwater fish fauna." |
| 10.40 - 11.00 | Anindo Choudhury. "Parascript studies and the historical biogeography of North American freshwater fishes." |
| 11.00 - 11.20 | Peter Sale. "Connectivity and Structure of Reef Fish Communities." |
| 11.20 - 11.40 | Pedro Peres Neto. "Patterns in the co-occurrence of fish species in streams: the role of site suitability, morphology and phylogeny versus species interactions." |
| 11.40 - 12.00 | Questions and answers. |
TENTATIVE LIST OF SPEAKERS, AND TITLES OF THEIR TALKS
Dr. John MaiseyMs. Agnes
Dettai
Muséum
National d'Histoire Naturelle
Laboratoire
d'Ichtyologie Générale et Appliquée
43, rue
Cuvier, F-75231 Paris Cedex 05, France
Email:
adettai@mnhn.fr
New
clades within the acanthomorph radiation from taxonomic congruence
among nuclear genes.
In the last two years, decisive steps have been made in favor of a resolution of the famous "bush at the top" of the teleostean tree, that includes several large and diverse assemblages of true spiny fishes (Acanthomorpha) and comprises more than 60 % of "fish" species. To investigate acanthomorph interrelationships, we are working on the separate and combined analyses of several independent molecular datasets for a large number of taxa (more than 90). The separate analyses allow a comparison of the resulting trees, identify the groups found in several or all of the datasets: those are considered to be probably due to the common phylogenetic signal. The groups obtained for only one dataset are dismissed (at least provisionally, until more information can be gathered) as results of the biases peculiar to that dataset. The results for mitochondrial ribosomal genes 12S and 16S, partial 28S nuclear ribosomal gene and the nuclear gene encoding rhodopsin have been presented before, but 1100 bp of the nuclear gene MLL (mixed-lineage leukemia like) have been obtained, adding a new dataset, and more important, adding new recurrent (henceforth considered as reliable) clades and confirming others. These clades can be proposed for future research in morphology and/or molecular phylogenetics of acanthomorphs.
Dr.
Lynne Parenti
Division
of Fishes
Smithsonian
Institution
National
Museum of Natural History,
Washington,
DC 20013-7012, U.S.A.
Email:
parenti.lynne@nmnh.si.edu
Evolution
and Phylogeny of Gonad Morphology in Bony Fishes
Gonad
morphology at the gross anatomical or histological levels has long
been studied to identify annual reproductive cycles and length of
breeding season, among other goals. Comparative surveys across
vertebrate taxa have not been detailed enough, however, 1) to
describe fully the differences and similarities between gonads of
bony fishes and other vertebrates, and 2) to use gonad morphology in
phylogenetic analyses. These are our aims. First, an emerging
constant among vertebrates is the similar morphology of the germinal
epithelium. All osteichthyans have a germinal epithelium composed of
somatic and germ cells in male and female gonads. Activity within the
germinal epithelium allows us to understand why lower vertebrates
have indeterminate fecundity whereas higher vertebrates do not: in
mammals and birds, the germinal epithelium produces oocytes only
during embryonic development, whereas in fishes the germinal
epithelium produces oocytes throughout the reproductive life of a
female. Second, we present examples at higher and lower taxonomic
levels, focusing on model organisms, of the relationship between
gonad morphology and phylogeny. For example, lower teleosts have an
anastomosing tubular testis which we identify as primitive for bony
fishes; whereas higher teleosts, such as the medaka, Oryzias
latipes have a derived lobular testis. Further, atherinomorph
fishes, the medaka and allies, have a unique type of lobular testis
and egg morphology correlated with an array of reproductive
modifications such as sperm-bundle formation, internal fertilization,
embryo retention, and live-bearing. The use of reproductive
morphology to identify phylogenetic patterns within bony fishes is
explored.
Dr. Paula
Mabee
Department
of Biology
414 East
Clark Street
University
of South Dakota
Vermillion,
SD 57069-2390, U.S.A.
Email:
pmabee@usd.edu
Evolution of Median Fin Modules in the Axial Skeleton of Fishes
Broadly conserved phylogenetic patterns in the directions of development within the median fins of fishes were identified from a survey of the developmental morphology of actinopterygian fishes. Four modules involved in their positioning and patterning were hypothesized. The earliest actinopterygians likely had dorsal and anal fins that were symmetrically positioned via a positioning module. The common patterning (differentiation) of skeletal elements within the dorsal and anal fins may have been set into motion by linkage to this positioning module. Frequent evolutionary changes in dorsal and anal fin position indicate a high level of dissociability of the positioning module from the patterning module. In contrast, the patterning of the dorsal and anal fins remains linked: in nearly all fishes, the endo- and exoskeletal elements of the two fins co-differentiate. In all fishes the exoskeletal fin rays differentiate in the same directions as the endoskeletal supports, indicating complete developmental integration. In acanthopterygians, a new first dorsal fin module evolved via duplication and divergence. The evolutionary sequence of their hierarchical assembly and secondary dissociation provides an example of how hierarchical assemblages of modules change over time. The changes in these modules during the evolution of fishes appear to be produced through dissociation, duplication and divergence, and co-option. Although the relationship between identified median fin modules and underlying mechanisms is unclear, Hox addresses may be correlated. Comparing homologous gene expression and function in various fishes may test these predictions. The median fins provide an example of how basic modularity is maintained over 400 million years of evolution.
Dr. John H. Postlethwait
Institute of Neuroscience, University of Oregon
1425 E. 13th Ave.
Eugene, OR, 97403, U.S.A.
jpostle@oregon.uoregon.edu
The role of genome duplication in the origin of developmental novelties and radiation of ray-fin fish
Ecological and genomic factors have both contributed to the remarkable diversity of ray-fin fish. Our maps of the zebrafish genome revealed a genome duplication event, and comparative genomic analysis showed that this occurred before the teleost radiation but after the divergence of ray-fin and lobe-fin fish. To investigate the role of genome duplication in evolution, we are studying molecular developmental mechanisms in a phylogenetically nested set of ray fin fish {amia[zebrafish(stickleback)(pufferfish)]} and comparing them to the lobe-fin fish Homo sapiens. For about 30% of human genes, zebrafish has two orthologues (called co-orthologues). For the other 70%, one of the duplicate copies has mutated to become a pseudogene or has been lost entirely. We have investigated the roles of duplicated Hox, Sox, and Krox genes during development by expression analysis and gene ablation studies. In general, duplicate genes appear to have been preserved by subfunctionalization, the parcelling out of ancestral gene functions between the two fish co-orthologues. In some cases, different gene copies have been preserved in the different species. In other cases, orthologous gene duplicates have evolved different developmental functions in the different species. We propose that a genome duplication event at the base of the teleost radiation may have provided genetic redundancies that facilitated the evolution of novel morphologies, and thus may have contributed to the wonderful diversity of teleost fish.
Dr. Edmund
Stellwag
Department
of Biology
East
Carolina University
Greenville,
NC 27858, U.S.A.
Email:
stellwage@mail.ecu.edu
Ray-finned fish genome duplication, organismal complexity and gene value optima
A growing body of evidence supports the hypothesis that genome expansion among chordates was fueled by a series of complete genome duplications. A corollary hypothesis proposes that these genome level duplications provided the genetic basis for the continuous increase in organismal complexity observed during chordate evolution. The discovery of an additional genomic duplication exclusive to the actinopterygian lineage, unparalleled by a similar duplication in sarcopterygians, has called into question the relationship between genome expansion and organismal complexity. Our laboratory is exploring a concept that we refer to as the Total Gene Value Optimum (TGVO). We hypothesize the existence of an optimum total gene value (Go) required for the maintenance of a particular level of organismal complexity. Given that genome duplications sharply increase the total gene value, we argue that selection will favor reduction in the total gene value toward Go, particularly in cases when genome duplications are unlinked to increases in organismal complexity. In a related fashion, reductions in the total gene value below Go may result in concomitant decreases in organismal complexity. The TGVO concept is useful in that it predicts that lineages exceeding Go resulting from genome level duplication will undergo gene loss toward the value of Go. Examination of the TGVO concept in actinopterygian and sarcopterygian lineages provides support for the TGVO concept, at least for the limited collection of developmental regulatory genes we have examined to date. Moreover, comparative genomic analyses suggest that actinopterygians are undergoing a reduction in gene content relative to sarcopterygians consistent with the TGVO concept.
Dr. Mark
W. Westneat
Department
of Zoology
Field
Museum of Natural History
1400 S
Lakeshore Dr
Chicago,
IL 60605-2496, U.S.A.
Email:
mwestneat@fieldmuseum.org
Functional Morphology of Feeding in Fishes: Phylogenetic Trends in Mechanical Design of Cranial Levers and Linkages
Fishes have met the challenge of capturing or ingesting food in a sensational diversity of ways. One of the hallmarks of this diversity is the complexity of the kinetic skull in fishes which may have 20 or more major skeletal elements capable of movement, driven by a score of different muscles. The feeding system in fishes is one of the central model systems in the field of vertebrate biomechanics. Recent research has focused on biomechanical models of the jaws that represent hypotheses of how force and motion are transferred from muscle through tendon to bone. This study develops a more complete set of such models for the many movable elements in the skulls of fishes. The lever mechanism of the lower jaw is joined by lever mechanisms for the skull, maxilla, opercle, and pectoral complex. New morphometric protocols and software applications for analysis of lever and linkage design are introduced. The geometric position and contraction physiology of muscles are critical to accurate estimations of lever and linkage function. A survey of skull mechanical designs throughout the phylogeny of fishes reveals a wide range of strategies for transfering force and motion during feeding. For example, the mechanical advantage of the mandible ranges from 0.05 in gar to 0.70 in damselfishes. Major evolutionary changes in the feeding mechanisms of fishes are illustrated from a morphological and mechanical perspective.
Dr. Giacomo Bernardi
Department of Ecology and Evolutionary Biology
University of California Santa Cruz
100 Shaffer Road, Santa Cruz
95060, California, U.S.A.
bernardi@biology.ucsc.edu
Recruitment patterns of the coral reef three-spot damselfish using molecular markers
The three-spot damelfish, Dascyllus trimaculatus , displays a bipartite life history with a pelagic larval phase and a benthic adult phase. Juveniles recruit and live sheltered in anemones, and once large enough, leave the anemones and swim freely over coral heads. A genetic survey of Indo-Pacific populations showed that the species partitions in five clades: 1. Red Sea - Indian Ocean, 2. Hawaii, 3. Marquesas islands, 4. French Polynesia, 5. Pacific Rim. In the case of French Polynesian individuals, approximately 4% of the adults harbor Pacific Rim haplotypes. This rare molecular marker was used to determine recruitment patterns in the island of Moorea, French Polynesia. By placing anemones at different distances from the reef crest, inside the lagoon, we were able to catch new recruits and score their haplotypes. We found that frequencies of the Pacific Rim haplotype were vastly different between recruits and adults, and between locations of recruitment. Hedgecock effects and natural selection hypotheses are discussed.
Dr. Eldredge Bermingham
Smithsonian Tropical Research Institute
Box 2072
Balboa, Ancon, Republic of Panama
eb@naos.si.edu
Evolutionary assembly of the Mesoamerican freshwater fish fauna
Over the past 2-7 million years there has been extensive intercontinental exchange of flora and fauna between North and South America across the isthmian bridge of Panama, a phenomenon known as the Great American Interchange because of its importance for New World biogeography. Although freshwater fishes participated in the Great American Interchange, biogeographic studies of this group are few in comparison to the detailed and instructive studies of mammals. Yet, because the dispersal of primary freshwater fishes depends on direct connections between drainage basins, historical biogeographic analysis of freshwater fishes permits strong inference regarding the biotic and geologic evolution of Mesoamerica. Using molecular systematic approaches, we have taken advantage of the unique isthmian experiment to investigate the modern assembly and diversification of a biota. We show that the primary freshwater fish fauna of Mesoamerica assembled in a relatively brief period of time, and posit several distinct, but relatively recent waves of invasion from putative source populations in northwestern Colombia. In subsequent colonization episodes the geographic scale of the dispersion of lineages was progressively more limited, a pattern we attribute to both biological contingency and landscape evolution. Thus, the fish eye view of Mesoamerica suggests a complex biogeographic history of overlaid cycles of colonization, diversification, sorting and extinction of lineages.
Dr. Anindo
Choudhury
Division
of Natural Sciences
St.
Norbert College
100 Grant
Street
DePere,
Wisconsin 54115, U.S.A.
Email:
anindo.choudhury@snc.edu
Parascript
studies and the historical biogeography of North American freshwater
fishes.
The historical biogeography of enduring associations between North American freshwater fishes and their metazoan parasites is explored in the tradition of parascript studies (using the language of parasites to reveal the history and biology of the hosts). Patterns of associations of selected groups of parasites (trematode flukes and nematodes) in three groups of freshwater fishes, the basal Acipenseriformes, and the ostariophysian families Ictaluridae and Catostomidae are examined/reviewed. Results suggest that: a) acipenserids were primitively diadromous, b) catostomidae are strong candidates as basal cypriniforms, and c) ictalurids do not have close biogeographical relationships with neotropical siluriforms, rather their affinities likely lie with the Afro-Asian siluriforms. The nature of such associations in the Mexican transition zone indicates little parasite exchange between neotropical and nearctic siluriforms. Hypotheses of historical colonization of North American freshwater environments from marine environments by ancestors of hosts such as Centrarchidae and Aplodinotus grunniens (the only truly freshwater Nearctic sciaenid) are strongly corroborated by the evidence from parasite systematics.
Dr. Peter
Sale
Biological
Sciences
University
of Windsor
Room 119
BIO, 401 Sunset
Windsor
Ontario N9B 3P4, Canada
Email:
sale@uwindsor.ca
Connectivity
and Structure of Reef Fish Communities.
While
descriptive data can suggest that the diverse communities of fish on
coral reefs are closely co-evolved, equilibrial assemblages of
species, these are highly dynamic, non-equilibrial assemblages with
structure driven more by patterns of recruitment of individual
species, than by patterns of resource allocation among differently
adapted phenotypes. As a consequence, local assemblages differ in
structure, and structure wanders through time. Individual fish are
confronted by different mixes of species in different times and
places. The recruitment process that drives these dynamics is
complex, being driven by several mechanisms, and local populations
receive some portion of their recruitment from distant sources.
Information on this connectivity among local populations is
critically important for management which is based increasingly on
use of marine protected areas (no-take zones) both to conserve, and
to provide sustainable fisheries. At present, however, we do not
know the spatial scale or the extent of this connectivity, and this
critical knowledge gap impedes both management, and fundamental
understanding. I will outline, and present preliminary results from
ECONAR, a regional scale, multi-disciplinary project to delineate the
scale and extent of this connectivity.
Dr. Pedro
R. Peres-Neto
Départment
de chimie-biologie - GREA
Université
du Québec à Trois-Rivières
Trois-Rivières,
Québec G9A 5H7
Canada
Email:
pperes@uqtr.ca
Patterns
in the co-occurrence of fish species in streams: the role of site
suitability, morphology and phylogeny versus species interactions.
A number
of studies at large scales have pointed out that abiotic factors and
recolonization dynamics appear to be more important in structuring
stream-fish assemblages than biotic interactions. In contrast,
experimental and field studies at small scales show the importance of
competition among stream fishes. However, given the highly variable
nature of stream systems over time, competition may not be intense
enough to generate complementary distributions via competitive
exclusion at larger scales. Complementary distribution is a
recurrent pattern observed in fish communities across stream
gradients, though it is not clear the instances whether this pattern
may be due to competitive interactions or to individual species
requirements. In this study, I introduce a series of null models
developed to provide a more robust evaluation of species associations
by facilitating the distinction between different processes that may
shape species distributions and community assembly. These null
models were applied to test whether conspicuous patterns in species
co-occurrences are more consistent with their differences in habitat
use, morphological features and/or phylogenetic constraints, or with
species interactions in fish communities in streams of a eastern
Brazil watershed. I conclude that patterns in species co-occurrences
within the studied system are driven by common species-habitat
relationships and species interactions may not play a significant
role in structuring these communities. I conclude by suggesting that
large-scale studies, where adequate designs and robust analytical
tools are applied can contribute substantially in understanding the
importance of different types of processes in structuring stream-fish
communities. Where appropriate, subsequent experiments at small
scales, can determine whether the putative process is reasonable at
smaller scales so that the power of explanation at larger scales is
reinforced.